TY - JOUR
T1 - ArrayExpress
T2 - A public database of gene expression data at EBI
AU - Rocca-Serra, Philippe
AU - Brazma, Alvis
AU - Parkinson, Helen
AU - Sarkans, Ugis
AU - Shojatalab, Mohammadreza
AU - Contrino, Sergio
AU - Vilo, Jaak
AU - Abeygunawardena, Niran
AU - Mukherjee, Gaurab
AU - Holloway, Ele
AU - Kapushesky, Misha
AU - Kemmeren, Patrick
AU - Lara, Gonzalo Garcia
AU - Oezcimen, Ahmet
AU - Sansone, Susanna Assunta
N1 - Funding Information:
The ArrayExpress project is funded by EMBL, a grant from the European Commission (TEMBLOR), and a Toxicogenomics database grant from ILSI. Initial funding was provided by Incyte and we particularly thank Lee Grower.
PY - 2003
Y1 - 2003
N2 - ArrayExpress is a public repository for microarray-based gene expression data, resulting from the implementation of the MAGE object model to ensure accurate data structuring and the MIAME standard, which defines the annotation requirements. ArrayExpress accepts data as MAGE-ML files for direct submissions or data from MIAMExpress, the MIAME compliant web-based annotation and submission tool of EBI. A team of curators supports the submission process, providing assistance in data annotation. Data retrieval is performed through a dedicated web interface. Relevant results may be exported to Expression-Profiler, the EBI based expression analysis tool available online (http://www.ebi.ac.uk/arrayexpress).
AB - ArrayExpress is a public repository for microarray-based gene expression data, resulting from the implementation of the MAGE object model to ensure accurate data structuring and the MIAME standard, which defines the annotation requirements. ArrayExpress accepts data as MAGE-ML files for direct submissions or data from MIAMExpress, the MIAME compliant web-based annotation and submission tool of EBI. A team of curators supports the submission process, providing assistance in data annotation. Data retrieval is performed through a dedicated web interface. Relevant results may be exported to Expression-Profiler, the EBI based expression analysis tool available online (http://www.ebi.ac.uk/arrayexpress).
KW - ArrayExpress
KW - Database
KW - Expression profiler
KW - MAGE-ML
KW - MGED ontology
KW - MIAME standard
KW - Microarray
UR - https://www.scopus.com/pages/publications/9144231310
U2 - 10.1016/j.crvi.2003.09.026
DO - 10.1016/j.crvi.2003.09.026
M3 - Article
C2 - 14744115
AN - SCOPUS:9144231310
SN - 1631-0691
VL - 326
SP - 1075
EP - 1078
JO - Comptes Rendus - Biologies
JF - Comptes Rendus - Biologies
IS - 10-11
ER -