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LncRNA-OIS1 regulates DPP4 activation to modulate senescence induced by RAS

  • Li Li
  • , Pieter C van Breugel
  • , Fabricio Loayza-Puch
  • , Alejandro Pineiro Ugalde
  • , Gozde Korkmaz
  • , Naama Messika-Gold
  • , Ruiqi Han
  • , Rui Lopes
  • , Eric P Barbera
  • , Hans Teunissen
  • , Elzo de Wit
  • , Ricardo J Soares
  • , Boye S Nielsen
  • , Kim Holmstrøm
  • , Dannys J Martínez-Herrera
  • , Maite Huarte
  • , Annita Louloupi
  • , Jarno Drost
  • , Ran Elkon
  • , Reuven Agami

Research output: Contribution to journalArticlepeer-review

45 Citations (Scopus)

Abstract

Oncogene-induced senescence (OIS), provoked in response to oncogenic activation, is considered an important tumor suppressor mechanism. Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt without a protein-coding capacity. Functional studies showed that deregulated lncRNA expression promote tumorigenesis and metastasis and that lncRNAs may exhibit tumor-suppressive and oncogenic function. Here, we first identified lncRNAs that were differentially expressed between senescent and non-senescent human fibroblast cells. Using RNA interference, we performed a loss-function screen targeting the differentially expressed lncRNAs, and identified lncRNA-OIS1 (lncRNA#32, AC008063.3 or ENSG00000233397) as a lncRNA required for OIS. Knockdown of lncRNA-OIS1 triggered bypass of senescence, higher proliferation rate, lower abundance of the cell-cycle inhibitor CDKN1A and high expression of cell-cycle-associated genes. Subcellular inspection of lncRNA-OIS1 indicated nuclear and cytosolic localization in both normal culture conditions as well as following oncogene induction. Interestingly, silencing lncRNA-OIS1 diminished the senescent-associated induction of a nearby gene (Dipeptidyl Peptidase 4, DPP4) with established role in tumor suppression. Intriguingly, similar to lncRNA-OIS1, silencing DPP4 caused senescence bypass, and ectopic expression of DPP4 in lncRNA-OIS1 knockdown cells restored the senescent phenotype. Thus, our data indicate that lncRNA-OIS1 links oncogenic induction and senescence with the activation of the tumor suppressor DPP4.

Original languageEnglish
Pages (from-to)4213-4227
Number of pages15
JournalNucleic acids research
Volume46
Issue number8
DOIs
Publication statusPublished - 4 May 2018
Externally publishedYes

Keywords

  • Cellular Senescence/genetics
  • Dipeptidyl Peptidase 4/genetics
  • Gene Expression
  • Genes, ras
  • Genome
  • HEK293 Cells
  • Humans
  • Neoplasms/genetics
  • RNA, Long Noncoding/metabolism

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