TY - JOUR
T1 - LncRNA-OIS1 regulates DPP4 activation to modulate senescence induced by RAS
AU - Li, Li
AU - van Breugel, Pieter C
AU - Loayza-Puch, Fabricio
AU - Ugalde, Alejandro Pineiro
AU - Korkmaz, Gozde
AU - Messika-Gold, Naama
AU - Han, Ruiqi
AU - Lopes, Rui
AU - Barbera, Eric P
AU - Teunissen, Hans
AU - de Wit, Elzo
AU - Soares, Ricardo J
AU - Nielsen, Boye S
AU - Holmstrøm, Kim
AU - Martínez-Herrera, Dannys J
AU - Huarte, Maite
AU - Louloupi, Annita
AU - Drost, Jarno
AU - Elkon, Ran
AU - Agami, Reuven
N1 - Publisher Copyright:
© The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research.
PY - 2018/5/4
Y1 - 2018/5/4
N2 - Oncogene-induced senescence (OIS), provoked in response to oncogenic activation, is considered an important tumor suppressor mechanism. Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt without a protein-coding capacity. Functional studies showed that deregulated lncRNA expression promote tumorigenesis and metastasis and that lncRNAs may exhibit tumor-suppressive and oncogenic function. Here, we first identified lncRNAs that were differentially expressed between senescent and non-senescent human fibroblast cells. Using RNA interference, we performed a loss-function screen targeting the differentially expressed lncRNAs, and identified lncRNA-OIS1 (lncRNA#32, AC008063.3 or ENSG00000233397) as a lncRNA required for OIS. Knockdown of lncRNA-OIS1 triggered bypass of senescence, higher proliferation rate, lower abundance of the cell-cycle inhibitor CDKN1A and high expression of cell-cycle-associated genes. Subcellular inspection of lncRNA-OIS1 indicated nuclear and cytosolic localization in both normal culture conditions as well as following oncogene induction. Interestingly, silencing lncRNA-OIS1 diminished the senescent-associated induction of a nearby gene (Dipeptidyl Peptidase 4, DPP4) with established role in tumor suppression. Intriguingly, similar to lncRNA-OIS1, silencing DPP4 caused senescence bypass, and ectopic expression of DPP4 in lncRNA-OIS1 knockdown cells restored the senescent phenotype. Thus, our data indicate that lncRNA-OIS1 links oncogenic induction and senescence with the activation of the tumor suppressor DPP4.
AB - Oncogene-induced senescence (OIS), provoked in response to oncogenic activation, is considered an important tumor suppressor mechanism. Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt without a protein-coding capacity. Functional studies showed that deregulated lncRNA expression promote tumorigenesis and metastasis and that lncRNAs may exhibit tumor-suppressive and oncogenic function. Here, we first identified lncRNAs that were differentially expressed between senescent and non-senescent human fibroblast cells. Using RNA interference, we performed a loss-function screen targeting the differentially expressed lncRNAs, and identified lncRNA-OIS1 (lncRNA#32, AC008063.3 or ENSG00000233397) as a lncRNA required for OIS. Knockdown of lncRNA-OIS1 triggered bypass of senescence, higher proliferation rate, lower abundance of the cell-cycle inhibitor CDKN1A and high expression of cell-cycle-associated genes. Subcellular inspection of lncRNA-OIS1 indicated nuclear and cytosolic localization in both normal culture conditions as well as following oncogene induction. Interestingly, silencing lncRNA-OIS1 diminished the senescent-associated induction of a nearby gene (Dipeptidyl Peptidase 4, DPP4) with established role in tumor suppression. Intriguingly, similar to lncRNA-OIS1, silencing DPP4 caused senescence bypass, and ectopic expression of DPP4 in lncRNA-OIS1 knockdown cells restored the senescent phenotype. Thus, our data indicate that lncRNA-OIS1 links oncogenic induction and senescence with the activation of the tumor suppressor DPP4.
KW - Cellular Senescence/genetics
KW - Dipeptidyl Peptidase 4/genetics
KW - Gene Expression
KW - Genes, ras
KW - Genome
KW - HEK293 Cells
KW - Humans
KW - Neoplasms/genetics
KW - RNA, Long Noncoding/metabolism
UR - http://www.scopus.com/inward/record.url?scp=85052581652&partnerID=8YFLogxK
U2 - 10.1093/nar/gky087
DO - 10.1093/nar/gky087
M3 - Article
C2 - 29481642
SN - 0305-1048
VL - 46
SP - 4213
EP - 4227
JO - Nucleic acids research
JF - Nucleic acids research
IS - 8
ER -